Klasifikacija Proteobacteria
Idi na navigaciju
Idi na pretragu
Uvod
Carstvo Proteobacteria je u klasifikaciju uveo Stackebrandt sa saradnicima (1988), koristeći sekvence 16S rRNA, pomoću kojih je definisao naizgled nepovezane grupe bakterija. Unutar tog carstva, oni su odredili pet zasebnih linija (tipova), od kojih svaka u nazivu ima slovo grčkog alfabeta (α, β, γ, δ, ε).
Klasifikacija
1. tip Alphaproteobacteria, sa klasama:
- klasa Rikettsiae
- red Rikettsiales
- rodovi: Rickettsia, Orientia, Anaplasma, Ehrlichia, Neorickettsia, Wolbachia, Holospora
- rodovi čija klasifikacija nije jasno određena: Aegyptianella, Caedibacter, Lyticum, Candidatus, Pseudocaedibacter, Pseudodolyticum, Tectibacter
- red Rikettsiales
- klasa Rhodobacteriae
- red Rhodospirillales
- rodovi: Rhodospirillum, Azospirillum, Levispirillum, Magnetospirillum, Phaeospirillum, Rhodocista, Rhodospira, Rhodovibrio, Roseospira, Roseospirillum, Skermanella, Sporospirillum (nedefinisana klasifikacija), Acetobacter, Acidiphilium, Acidisphaera, Acidocella, Acidomonas, Asaia, Craurococcus, Gluconacetobacter, Gluconobacter, Paracraurococcus, Rhodopila, Roseococcus, Roseomonas, Stella, Zavarzinia
- red Rhodobacterales
- rodovi: Rhodobacter, Ahrensia, Amaricoccus, Antarctobacter, Gemmobacter, Hirschia, Hyphomonas, Ketogluconicigenium, Maricaulis, Methylarcula, Octadecabacter, Paracoccus, Rhodobaca, Rhodovulvum, Roseibium, Roseinatronobacter, Roseivivax, Roseobacter, Roseovarius, Rubrimonas, Rugegeria, Sagittula, Staleya, Stappia, Sulfitobacter, Rhodothalassium (nedefinisana klasifikacija)
- red Sphingomonadales
- red Caulobacteriales
- rodovi : Caulobacter, Asticcacaulis, Brevundimonas, Phenylobacterium
- red Rhizobiales
- rodovi: Rhizobium, Agrobacterium, Allorhizobium, Carbophilus, Chelatobacter, Ensifer, Sinorhizobium, Bartonella, Brucella, Mycoplana, Ochrobactrum, Phyllobacterium, Aminobacter, Aquamicrobium, Defluvibacter, Candidatus, [Mesorhizobium]], Pseudaminobacter, Methylocystis, Albibacter, Methylosinus, Methylopila (nedefinisano mesto u klasifikaciji), Beijerinckia, Chelatococcus, Methylocella, Bradyrhizobium, Afipia, Agromonas, Blastobacter, Bosea, Nitrobacter, Oligotropha, Rhodoblastus, Rhodopseudomonas, Hyphomicrobium, Ancalomicrobium, Ancylobacter, Angulomicrobium, Aquabacter, Azorhizobium, Blastochloris, Devosia, Dichotomicrobium, Filomicrobium, Gemmiger, Labrys, Methylorhabdus, Pedomicrobium, Prosthecomicrobium, Rhodomicrobium, Rhodoplanes, Seliberia, Starkeya, Xanthobacter, Methylobacterium, Rhodobium
- red Rhodospirillales
- klasa Rikettsiae
2. tip Betaproteobacteria
- klasa Betaproteobacteriae
- red Burkholderiales
- rodovi: Burkholderia, Cupriavidus, Lautropia, Pandoraea, Paucimonas, Polynucleobacter, Ralstonia, Thermothrix, Oxalobacter, Duganella, Herbaspirillum, Janthinobacterium, Massilia, Telluria, Alcaligenes, Achromobacter, Bordetella, Derxia, Oligella, Pelistega, Pigmentiphaga, Sutterella, Taylorella, Comamonas, Acidovorax, Brachymonas, Delftia, Hydrogenophaga, Lampropedia, Macromonas, Polaromonas, Rhodoferax, Variovorax,
- rodovi koji nisu klasifikovani: Aquabacterium, Idernella, Leptothrix, Roseateles, Rubrivivax, Sphaerotilus, Tepidomonas, Thiomonas, Xylophilius
- red Hidrogenophilales
- rodovi: Hydrogenophilus, Thiobacillus
- red Methylophilales
- rodovi: Methylophilus, Methylobacillus, Methylovorus
- red Neisseriales
- red Nitrosomonadales
- rodovi: Nitrosomonas, Nitrosolobus, Nitrosospira, Nitrosovibrio, Spirillum, Gallionella
- red Rhodocyclales
- rodovi: Rhodocyclus, Azoarcus, Azonexus, Azospira, Azovibrio, Dechloromonas, Dechlorosoma, Ferribacterium, Propionibacter, Propionivibrio, Thauera, Zoogloea
- red Burkholderiales
- klasa Betaproteobacteriae
3. tip Gammaproteobacteria
- klasa Chromatiae
- red Chromatiales
- rodovi: Chromatium, Allochromatium, Halochromatium, Isochromatium, Lamprobacter, Lamprocystis, Marichromatium, Nitrosococcus, Pfennigia, Rhabdochromatium, Thermochromatium, Thioalkalicoccus, Thiocapsa, Thiococcus, Thiocystis, Thiodictyon, Thioflavicoccus, Thiohalocapsa, Thiolamprovum, Thiopedia, Thiorhodococcus, Thiorhodovibrio, Thiospirillum, Ectothiorhodospira, Arhodomonas, Halorhodospira, Nitrococcus, Thioalkalivibrio, Thiorhodospira, Halothiobacillus
- red Chromatiales
- klasa Enterobacteriae
- red Acidithiobacullales
- rodovi: Acidithiobacillus, Thermithiobacillus
- red Xanthomonadales
- rodovi: Xanthomonas, Frateuria, Luteimonas, Lysobacter, Nevskia, Pseudoxanthomonas, Rhodanobacter, Schineria, Stenotrophomonas, Thermomonas, Xylella
- red Cardiobacteriales
- rodovi: Cardiobacterium, Dichelobacter, Suttonella
- red Thiotrichales
- rodovi: Thiothrix, Achromatium, Beggiatoa, Leucothrix, Thiobacterium, Thiomargarita, Thioploca, Thiospira, Piscirickettsia, Cycloclasticus, Hydrogenovibrio, Methylophaga, Thioalkalimicrobium, Thiomicrospira, Francisella
- red legionellales
- rodovi: Legionella, Coxiella, Rickettsiella
- red Methylococcales
- rodovi: Methylococcus, Methylobacter, Methylocaldum, Methylomicrobium, Methylomonas, Methylosarcina, Methylosphaera
- red Oceanospirillales
- rodovi: Oceanospirillum, Balneatrix, Marinomonas, Marinospirillum, Neptunomonas, Alcanivorax, Hahella, Halomonas, Carnimonas, Chromohalobacter, Zymobacter
- red Pseudomonadales
- rodovi: Pseudomonas, Azomonas, Azotobacter, Cellvibrio, Mesophilobacter, Rhizobacter, Rugamonas, Serpens, Moraxella, Acinetobacter, Psychrobacter, Enhydrobacter (nedefinisano mesto u klasifikaciji)
- red Alteromonadales
- rodovi: Alteromonas, Alishewanella, Colwellia, Ferrimonas, Glaciecola, Idiomarina, Marinobacter, Marinobacterium, Microbulbifer, Moritella, Pseudoalteromonas, Psychromonas, Shewanella
- red Vibrionales
- rodovi: Vibrio, Photobacterium, Salinivibrio
- red Aeromonadales
- rodovi: Aeromonas, Oceanimonas, Tolumonas (nedefinisano mesto u klasifikaciji), Succinivibrio, Anaerobiospirillum, Ruminobacter, Succinimonas
- red Enterobacteriales
- rodovi: Escherichia, Alterococcus, Arsenophonus, Brenneria, Buchneria, Budvicia, Buttiauxella, Calymmatobacterium, Cedecea, Citrobacter, Edwardsiella, Enterobacter, Erwinia, Ewingella, Hafnia, Klebsiella, Kluyvera, Leclercia, Leminorella, Moellerella, Morganella, Obesumbacterium, Pantoea, Pectobacterium, "Candidatus", Photorhabdus, Plesiomonas, Pragia, Proteus, Providencia, Rahnella, Saccharobacter, Salmonella, Serratia, Shigella, Sodalis, Tatumella, Trabulsiella, Wigglesworthia, Xenorhabdus, Yersinia, Yokenella
- red Pasteurellales
- rodovi: Pasteurella, Actinobacillus, Haemophilus, Lonepinella, Manheimia, Phocoenobacter
- red Acidithiobacullales
- klasa Chromatiae
4. tip Deltaproteobacteria
- klasa Anoxydeltabacteria
- red Desulfurellales
- rodovi: Desulfurella, Hippea
- red Desulfovibrionales
- rodovi: Desulfovibrio, Bilophila, Lawsonia, Desulfomicrobium, Desulfonatronovibrio, Desulfothermus, Desulfonatronum
- red Desulfobacteriales
- rodovi: Desulfobacter, Desulfobacterium, Desulfobacula, Desulfobotulus, Desulfocella, Desulfococcus, Desulfofaba, Desulfofrigus, Desulfonema, Desulfosarcina, Desulfospira, Desulfotignum, Desulfobulbus, Desulfocapsa, Desulfofustis, Desulfotalea, Nitrospina
- red desulfacares
- rod: Desulfarculus
- red Desulfurmonales
- rodovi: Desulfuromonas, Desulfuromusa, Malonomonas, Pelobacter, Geobacter, Trichlorobacter
- red: Syntrophobacteriales
- rodovi: Syntrophobacter, Desulfacinum, Desulforhabdus, Desulfovirga, Thermodesulforhabdus, Syntrophus, Desulfobacca, Desulfomonile, Smithella
- red Desulfurellales
- klasa Oxydeltabacteria
- red Bdellovibrionales
- rodovi: Bdellovibrio, Bacteriovorax, Micavibrio, Vampirovibrio
- red Myxococcales
- rodovi: Myxococcus, Corallococcus, Pyxicoccus, Cystobacter, Archangium, Hyalangium, Melettangium, Stigmatella, Polyangium, Byssophaga, Chondromyces, Haploangium, Jahnia, Sorangium, Nannocystis, Kofleria
- red Bdellovibrionales
- klasa Anoxydeltabacteria
5. tip Epsilonproteobacteria
- klasa Campylobacteriae
- red Nautiliales
- rodovi: Nautilia, Caminibacter, Lebetimonas
- rodovi neodređene klasifikacije: Hydrogenimonas, Nitratiruptor, Thioreductor
- red Campylobacteriales
- rodovi: Campylobacter, Arcobacter, Nitratifractor, Sulfurospirillum, Sulfurimonas, Sulfurovum, Sulfiricurvum, Thiomicrospira, Helicobacter, Thiovulum, Wolinella
- red Nautiliales
- klasa Campylobacteriae
Srodne stranice
Literatura
- Holt, Jack R, Carlos A. Iudica (2009): Taxa of Life